Evidence for mtDNA capture in the jacamar Galbula leucogastra/chalcothorax species-complex and insights on the evolution of white-sand ecosystems in the Amazon basin
Jacamar species occur throughout Amazonia, with most species occupying forested habitats. One species-complex, Galbula leucogastra/chalcothorax, is associated to white sand ecosystems (WSE). Previous studies of WSE bird species recovered shallow genetic structure in mtDNA coupled with signs of gene...
| Autor principal: | Ferreira, Mateus |
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| Outros Autores: | Fernandes, Alexandre Mendes, Aleixo, Alexandre, Antonelli, Alexandre, Olsson, Urban, Bates, John Marshall, Cracraft, Joel L., Ribas, Camila Cherem |
| Grau: | Artigo |
| Idioma: | English |
| Publicado em: |
Molecular Phylogenetics and Evolution
2020
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| Acesso em linha: |
https://repositorio.inpa.gov.br/handle/1/16818 |
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oai:repositorio:1-16818 |
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oai:repositorio:1-16818 Evidence for mtDNA capture in the jacamar Galbula leucogastra/chalcothorax species-complex and insights on the evolution of white-sand ecosystems in the Amazon basin Ferreira, Mateus Fernandes, Alexandre Mendes Aleixo, Alexandre Antonelli, Alexandre Olsson, Urban Bates, John Marshall Cracraft, Joel L. Ribas, Camila Cherem Dna, Mitochondrial Animals Bayes Theorem Bird Brasil Cell Nucleus Dna Sequence Ecosystem Evolution Gene Flow Gene Locus Genetics Haplotype Genome, Mitochondrial Mitochondrion Phylogeny Phylogeography Species Difference Animal Bayes Theorem Biological Evolution Birds Brasil Cell Nucleus Dna, Mitochondrial Ecosystem Gene Flow Genetic Loci Genome, Mitochondrial Haplotypes Mitochondria Phylogeny Phylogeography Sequence Analysis, Dna Species Specificity Jacamar species occur throughout Amazonia, with most species occupying forested habitats. One species-complex, Galbula leucogastra/chalcothorax, is associated to white sand ecosystems (WSE). Previous studies of WSE bird species recovered shallow genetic structure in mtDNA coupled with signs of gene flow among WSE patches. Here, we characterize diversification of the G. leucogastra/chalcothorax species-complex with dense sampling across its distribution using mitochondrial and genomic (Ultraconserved Elements, UCEs) DNA sequences. We performed concatenated likelihood and Bayesian analysis, as well as a species-tree analysis using ∗BEAST, to establish the phylogenetic relationships among populations. The mtDNA results recovered at least six geographically-structured lineages, with G. chalcothorax embedded within lineages of G. leucogastra. In contrast, both concatenated and species-tree analyses of UCE data recovered G. chalcothorax as sister to all G. leucogastra lineages. We hypothesize that the mitochondrial genome of one of the G. leucogastra lineage (Madeira) was captured into G. chalcothorax in the past. We discuss how WSE evolution and the coevolution of mtDNA and nuclear genes might have played a role in this apparently rare event. © 2018 Elsevier Inc. 2020-06-15T21:36:31Z 2020-06-15T21:36:31Z 2018 Artigo https://repositorio.inpa.gov.br/handle/1/16818 10.1016/j.ympev.2018.07.007 en Volume 129, Pags. 149-157 Restrito Molecular Phylogenetics and Evolution |
| institution |
Instituto Nacional de Pesquisas da Amazônia - Repositório Institucional |
| collection |
INPA-RI |
| language |
English |
| topic |
Dna, Mitochondrial Animals Bayes Theorem Bird Brasil Cell Nucleus Dna Sequence Ecosystem Evolution Gene Flow Gene Locus Genetics Haplotype Genome, Mitochondrial Mitochondrion Phylogeny Phylogeography Species Difference Animal Bayes Theorem Biological Evolution Birds Brasil Cell Nucleus Dna, Mitochondrial Ecosystem Gene Flow Genetic Loci Genome, Mitochondrial Haplotypes Mitochondria Phylogeny Phylogeography Sequence Analysis, Dna Species Specificity |
| spellingShingle |
Dna, Mitochondrial Animals Bayes Theorem Bird Brasil Cell Nucleus Dna Sequence Ecosystem Evolution Gene Flow Gene Locus Genetics Haplotype Genome, Mitochondrial Mitochondrion Phylogeny Phylogeography Species Difference Animal Bayes Theorem Biological Evolution Birds Brasil Cell Nucleus Dna, Mitochondrial Ecosystem Gene Flow Genetic Loci Genome, Mitochondrial Haplotypes Mitochondria Phylogeny Phylogeography Sequence Analysis, Dna Species Specificity Ferreira, Mateus Evidence for mtDNA capture in the jacamar Galbula leucogastra/chalcothorax species-complex and insights on the evolution of white-sand ecosystems in the Amazon basin |
| topic_facet |
Dna, Mitochondrial Animals Bayes Theorem Bird Brasil Cell Nucleus Dna Sequence Ecosystem Evolution Gene Flow Gene Locus Genetics Haplotype Genome, Mitochondrial Mitochondrion Phylogeny Phylogeography Species Difference Animal Bayes Theorem Biological Evolution Birds Brasil Cell Nucleus Dna, Mitochondrial Ecosystem Gene Flow Genetic Loci Genome, Mitochondrial Haplotypes Mitochondria Phylogeny Phylogeography Sequence Analysis, Dna Species Specificity |
| description |
Jacamar species occur throughout Amazonia, with most species occupying forested habitats. One species-complex, Galbula leucogastra/chalcothorax, is associated to white sand ecosystems (WSE). Previous studies of WSE bird species recovered shallow genetic structure in mtDNA coupled with signs of gene flow among WSE patches. Here, we characterize diversification of the G. leucogastra/chalcothorax species-complex with dense sampling across its distribution using mitochondrial and genomic (Ultraconserved Elements, UCEs) DNA sequences. We performed concatenated likelihood and Bayesian analysis, as well as a species-tree analysis using ∗BEAST, to establish the phylogenetic relationships among populations. The mtDNA results recovered at least six geographically-structured lineages, with G. chalcothorax embedded within lineages of G. leucogastra. In contrast, both concatenated and species-tree analyses of UCE data recovered G. chalcothorax as sister to all G. leucogastra lineages. We hypothesize that the mitochondrial genome of one of the G. leucogastra lineage (Madeira) was captured into G. chalcothorax in the past. We discuss how WSE evolution and the coevolution of mtDNA and nuclear genes might have played a role in this apparently rare event. © 2018 Elsevier Inc. |
| format |
Artigo |
| author |
Ferreira, Mateus |
| author2 |
Fernandes, Alexandre Mendes Aleixo, Alexandre Antonelli, Alexandre Olsson, Urban Bates, John Marshall Cracraft, Joel L. Ribas, Camila Cherem |
| author2Str |
Fernandes, Alexandre Mendes Aleixo, Alexandre Antonelli, Alexandre Olsson, Urban Bates, John Marshall Cracraft, Joel L. Ribas, Camila Cherem |
| title |
Evidence for mtDNA capture in the jacamar Galbula leucogastra/chalcothorax species-complex and insights on the evolution of white-sand ecosystems in the Amazon basin |
| title_short |
Evidence for mtDNA capture in the jacamar Galbula leucogastra/chalcothorax species-complex and insights on the evolution of white-sand ecosystems in the Amazon basin |
| title_full |
Evidence for mtDNA capture in the jacamar Galbula leucogastra/chalcothorax species-complex and insights on the evolution of white-sand ecosystems in the Amazon basin |
| title_fullStr |
Evidence for mtDNA capture in the jacamar Galbula leucogastra/chalcothorax species-complex and insights on the evolution of white-sand ecosystems in the Amazon basin |
| title_full_unstemmed |
Evidence for mtDNA capture in the jacamar Galbula leucogastra/chalcothorax species-complex and insights on the evolution of white-sand ecosystems in the Amazon basin |
| title_sort |
evidence for mtdna capture in the jacamar galbula leucogastra/chalcothorax species-complex and insights on the evolution of white-sand ecosystems in the amazon basin |
| publisher |
Molecular Phylogenetics and Evolution |
| publishDate |
2020 |
| url |
https://repositorio.inpa.gov.br/handle/1/16818 |
| _version_ |
1787143732998438912 |
| score |
11.675608 |